
Dr Dylan Bergen
Expertise
Current positions
Research Associate (Versus Athritis Fellow)
Bristol Medical School (THS)
Contact
Media contact
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Research interests
I am interested in how the skeleton (cartilage/bone) is formed. The skeletal system has many important functions such as defining the shape of an organism, making locomotion of larger organisms possible, serving as a calcium reservoir, performing important endocrine functions and giving protection to vital organs (e.g. brain, lungs, and heart). In bone and cartilage elements, collagenous matrix is laid down in a tissue specific way giving these skeletal tissues their specific characteristics (e.g. cartilage is spongy, bone is mineralised) in the right place. Healthy bone is constantly remodelled (the complete human skeleton is slowly regenerated over approximately ten years) to repair microfractures caused by loading of bone. This depends on a fine balance of bone building cells (osteoblasts and osteocytes) and bone degrading cells (osteoclasts) to maintain the right amount of bone.
The most common bone disease is osteoporosis which is diagnosed by assessing bone mineral density in the clinic (by for example using a DXA scan). Low bone mineral density is the parameter to diagnose osteoporosis, which affects ~50% of women and ~33% of men above the age of 55. Low bone mineral density is caused by a reduction in calcified collagenous bone matrix caused by an altered balance of bone building cells and bone degrading cells. This results in brittle (porous) bones that fracture easily leading to serious, sometimes even life threatening, fractures in the hip, vertebrae, and long bones (ribs, femur etc.). The current clinical practice to treat osteoporosis is to mainly block osteo-catabolic (osteoclasts, bone degrading) pathways. These unfortunately do not fully recover bone mineral density and bone strength.
To find bone building (osteo-anabolic) genetic factors for a bone metabolism disorder like osteoporosis we need to better understand the biology of bone formation and homeostasis (balance between osteoblast and osteoclast activity). My collaborative research is informed by large human genomic datasets (genome wide association studies, whole exome sequencing, pedigree studies) to identify important genetic factors in the population that alter bone mineral density. Large human genomic datasets of bone mineral density offer a great way to identify new bone mineral density genes however, these strategies produce 100s of potential genes. I am currently using a prioritisation pipeline to select the best candidates for studies in the lab. The aim is to find new osteoanabolic (stimulating osteoblasts and bone strength) genetic factors and study these in the lab to gather detailed biological information for these potential osteo-anabolic drug targets.
I am using the zebrafish as they allow relatively fast screening of these identified genes in a cost-effective way. As the genes and signalling pathways that are important in regulating the skeletal system are evolutionarily conserved, the zebrafish offers a way to model human skeletal disease genes. This means that these experiments will provide first line of evidence of the effects on the skeleton and help to inform further studies (i.e. in other model systems as well) to develop strategies to target the osteo-anabolic genetic factors and their pathways relevant for bone metabolism disorders.
Projects and supervisions
Research projects
Functional validation of novel osteo-anabolic factors in the zebrafish
Principal Investigator
Description
Genes derived from my in silico prioritisation pipeline will be studied in the zebrafish model as part of my Foundation Fellowship from Versus Arthritis.
I will also use zebrafish scales to…Managing organisational unit
Bristol Medical School (THS)Dates
01/04/2019
In silico prioritisation of genes that underpin osteoporosis
Principal Investigator
Description
The aim of this project is to identify new genes that regulate bone mineral density identified in humans using two large genetic studies. Funded by Elizabeth Blackwell Institute, Postgraduate Extension…Managing organisational unit
Bristol Medical School (THS)Dates
01/09/2017
A dual role for the Golgi matrix protein giantin in extracellular matrix secretion and cilia function
Principal Investigator
Role
Student
Description
The Golgi complex is a processing centre within the biosynthetic secretory pathway, essential for the delivery and production of functional extracellular matrix (ECM), including collagen and proteoglycans. Those large cargoes…Managing organisational unit
School of BiochemistryDates
01/10/2012 to 14/11/2017
Publications
Recent publications
21/01/2022Regenerating zebrafish scales express a subset of evolutionary conserved genes involved in human skeletal disease
BMC Biology
Giantin is required for intracellular N-terminal processing of type I procollagen
Journal of Cell Biology
Pharmacological Manipulation of Early Zebrafish Skeletal Development Shows an Important Role for Smad9 in Control of Skeletal Progenitor Populations
Biomolecules
A Roadmap to Gene Discoveries and Novel Therapies in Monogenic Low and High Bone Mass Disorders
Frontiers in Endocrinology
Perspective of the GEMSTONE Consortium on Current and Future Approaches to Functional Validation for Skeletal Genetic Disease Using Cellular, Molecular and Animal-Modeling Techniques
Frontiers in Endocrinology